Gene detail

Detailed information of evm.model.Chr01.29 in Hemicorallium imperiale

Genomic Location: Chr01:155042...155380
NR annotation: WP_084200655.1, ISC system 2Fe-2S type ferredoxin [Halioglobus japonicus]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr01.29 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q51383	2Fe-2S ferredoxin OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=fdx PE=3 SV=2
P0A9R5	2Fe-2S ferredoxin OS=Escherichia coli O157:H7 OX=83334 GN=fdx PE=3 SV=2
P0A9R4	2Fe-2S ferredoxin OS=Escherichia coli (strain K12) OX=83333 GN=fdx PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002135 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00111 all species →	Fer2	2Fe-2S iron-sulfur cluster binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011536 all species →	Family	Ferredoxin 2Fe-2S type, proteobacteria	Interproscan
IPR001041 all species →	Domain	2Fe-2S ferredoxin-type iron-sulfur binding domain	Interproscan
IPR001055 all species →	Family	Adrenodoxin-like	Interproscan
IPR036010 all species →	Homologous_superfamily	2Fe-2S ferredoxin-like superfamily	Interproscan
IPR018298 all species →	Binding_site	Adrenodoxin, iron-sulphur binding site	Interproscan
IPR012675 all species →	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23426 all species →	FERREDOXIN/ADRENODOXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009055 all species →	Molecular Function	electron transfer activity	Interproscan
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0140647 all species →	Biological Process	P450-containing electron transport chain	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04755	fdx; ferredoxin, 2Fe-2S	-	Energy metabolism	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.