Gene detail

Detailed information of evm.model.Chr01.30 in Hemicorallium imperiale

Genomic Location: Chr01:155417...157258
NR annotation: CAA0100529.1, Chaperone protein HscA [BD1-7 clade bacterium]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr01.30 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4ZX30	Chaperone protein HscA homolog OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=hscA PE=3 SV=1
Q48M01	Chaperone protein HscA homolog OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=hscA PE=3 SV=1
Q886Z7	Chaperone protein HscA homolog OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=hscA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000441 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012 all species →	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010236 all species →	Family	ISC system FeS cluster assembly, HscA chaperone	Interproscan
IPR018181 all species →	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR029047 all species →	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR029048 all species →	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR013126 all species →	Family	Heat shock protein 70 family	Interproscan
IPR042039 all species →	Domain	HscA chaperone, nucleotide-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375 all species →	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04044	hscA; molecular chaperone HscA	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.