Detailed information of evm.model.Chr01.301 in Hemicorallium imperiale

Genomic Location: Chr01:7447566...7472759
NR annotation: CAB4001777.1, Shroom2-like isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q09JY9Protein Shroom2 OS=Xenopus tropicalis OX=8364 GN=shroom2 PE=2 SV=1
Q27IV2Protein Shroom3 OS=Xenopus laevis OX=8355 GN=shroom3 PE=2 SV=1
Q7TP36Protein Shroom2 OS=Rattus norvegicus OX=10116 GN=Shroom2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08687ASD2Apx/Shroom domain ASD2FamilyInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027685FamilyShroom familyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR014799DomainApx/Shrm Domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15012APICAL PROTEIN/SHROOM-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0043296Cellular Componentapical junction complexInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP