Detailed information of evm.model.Chr01.32 in Hemicorallium imperiale

Genomic Location: Chr01:157844...158167
NR annotation: MSQ80913.1, iron-sulfur cluster assembly protein IscA [Candidatus Methylopumilus sp.]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.32 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C5BEU3Iron-binding protein IscA OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=iscA PE=3 SV=1
A8GHY1Iron-binding protein IscA OS=Serratia proteamaculans (strain 568) OX=399741 GN=iscA PE=3 SV=1
C6DBI9Iron-binding protein IscA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=iscA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006887 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01521
all species →		Fe-S_biosynIron-sulphur cluster biosynthesisFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011302
all species →		FamilyIron-binding protein IscA, proteobacteriaInterproscan
IPR050322
all species →		FamilyIron-sulfur cluster assembly and transfer HesB/IscAInterproscan
IPR035903
all species →		Homologous_superfamilyHesB-like domain superfamilyInterproscan
IPR000361
all species →		DomainFeS cluster biogenesisInterproscan
IPR017870
all species →		Conserved_siteFeS cluster insertion, C-terminal, conserved siteInterproscan
IPR016092
all species →		FamilyFeS cluster insertion proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10072
all species →		IRON-SULFUR CLUSTER ASSEMBLY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016226
all species →		Biological Processiron-sulfur cluster assemblyInterproscan
GO:0051536
all species →		Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0051537
all species →		Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0097428
all species →		Biological Processprotein maturation by iron-sulfur cluster transferInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13628iscA; iron-sulfur cluster assembly protein-Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP