Detailed information of evm.model.Chr01.34 in Hemicorallium imperiale

Genomic Location: Chr01:158580...159812
NR annotation: CAA0082854.1, Cysteine desulfurase IscS [BD1-7 clade bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.34 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6LU62Cysteine desulfurase IscS OS=Photobacterium profundum (strain SS9) OX=298386 GN=iscS PE=3 SV=1
Q8DEY7Cysteine desulfurase IscS OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=iscS PE=3 SV=1
Q7MNG2Cysteine desulfurase IscS OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=iscS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001536 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00266
all species →		Aminotran_5Aminotransferase class-VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR010240
all species →		FamilyCysteine desulfurase IscSInterproscan
IPR016454
all species →		FamilyCysteine desulfuraseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR020578
all species →		Binding_siteAminotransferase class-V, pyridoxal-phosphate binding siteInterproscan
IPR000192
all species →		DomainAminotransferase class V domainInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11601
all species →		CYSTEINE DESULFURYLASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0031071
all species →		Molecular Functioncysteine desulfurase activityInterproscan
GO:0044571
all species →		Biological Process[2Fe-2S] cluster assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04487iscS, NFS1; cysteine desulfuraseEC:2.8.1.7
Prokaryotic defense systemko02048deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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