Detailed information of evm.model.Chr01.393 in Hemicorallium imperiale

Genomic Location: Chr01:9941419...9965183
NR annotation: CAB4012630.1, inverted formin-2-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.393 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NTV6Inverted formin-2 OS=Xenopus laevis OX=8355 GN=inf2 PE=2 SV=1
Q0IHV1Inverted formin-2 OS=Xenopus tropicalis OX=8364 GN=inf2 PE=2 SV=1
Q0GNC1Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002138 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06346
all species →		Drf_FH1Formin Homology Region 1RepeatInterproscan
PF02181
all species →		FH2Formin Homology 2 DomainFamilyInterproscan
PF06367
all species →		Drf_FH3Diaphanous FH3 DomainRepeatInterproscan
PF06371
all species →		Drf_GBDDiaphanous GTPase-binding DomainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010473
all species →		DomainFormin, GTPase-binding domainInterproscan
IPR014768
all species →		DomainRho GTPase-binding/formin homology 3 (GBD/FH3) domainInterproscan
IPR010472
all species →		DomainFormin, FH3 domainInterproscan
IPR015425
all species →		DomainFormin, FH2 domainInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR027649
all species →		FamilyInverted formin-2Interproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR042201
all species →		Homologous_superfamilyFormin, FH2 domain superfamilyInterproscan
IPR003124
all species →		DomainWH2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46345
all species →		INVERTED FORMIN-2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003779
all species →		Molecular Functionactin bindingInterproscan
GO:0030036
all species →		Biological Processactin cytoskeleton organizationInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:0016043
all species →		Biological Processcellular component organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.393.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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