Detailed information of evm.model.Chr01.4093 in Hemicorallium imperiale

Genomic Location: Chr01:80873437...80916335
NR annotation: CAB4036638.1, Hypothetical predicted protein [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.4093 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q92373Replication factor A protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssb2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006404 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01336
all species →		tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR040260
all species →		FamilyReplication factor A protein-likeInterproscan
IPR004365
all species →		DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13989
all species →		REPLICATION PROTEIN A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0000781
all species →		Cellular Componentchromosome, telomeric regionInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005662
all species →		Cellular ComponentDNA replication factor A complexInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.4093.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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