Detailed information of evm.model.Chr01.433_evm.model.Chr01.434 in Hemicorallium imperiale

Genomic Location: Chr01:10717561...10739009
NR annotation: XP_028416566.1, ribosomal RNA-processing protein 8-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.433_evm.model.Chr01.434 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8XI07Ribosomal RNA-processing protein 8 OS=Caenorhabditis briggsae OX=6238 GN=rrp-8 PE=3 SV=1
O43159Ribosomal RNA-processing protein 8 OS=Homo sapiens OX=9606 GN=RRP8 PE=1 SV=2
Q9DB85Ribosomal RNA-processing protein 8 OS=Mus musculus OX=10090 GN=Rrp8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007484 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05148
all species →		Methyltransf_8Hypothetical methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042036
all species →		Homologous_superfamilyRibosomal RNA-processing protein 8, N-terminal domainInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR007823
all species →		FamilyRibosomal RNA processing protein 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12787
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0000183
all species →		Biological ProcessrDNA heterochromatin formationInterproscan
GO:0005677
all species →		Cellular Componentchromatin silencing complexInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0033553
all species →		Cellular ComponentrDNA heterochromatinInterproscan
GO:0035064
all species →		Molecular Functionmethylated histone bindingInterproscan
GO:0042149
all species →		Biological Processcellular response to glucose starvationInterproscan
GO:0046015
all species →		Biological Processregulation of transcription by glucoseInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14850RRP8; ribosomal RNA-processing protein 8EC:2.1.1.287
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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