Detailed information of evm.model.Chr01.497 in Hemicorallium imperiale

Genomic Location: Chr01:12933370...12968068
NR annotation: XP_028397689.1, acidic repeat-containing protein-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.497 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0R4IWG9Germ cell nuclear acidic protein OS=Danio rerio OX=7955 GN=gcna PE=3 SV=1
Q96QF7Germ cell nuclear acidic protein OS=Homo sapiens OX=9606 GN=GCNA PE=1 SV=1
Q7KW09Germ cell nuclear acidic protein OS=Drosophila melanogaster OX=7227 GN=Gcna PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006312 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10263
all species →		SprT-likeSprT-like familyDomainInterproscan
PF17283
all species →		Zn_ribbon_SprTSprT-like zinc ribbon domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006640
all species →		DomainSprT-likeInterproscan
IPR035240
all species →		DomainSprT-like, zinc ribbon domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23099
all species →		TRANSCRIPTIONAL REGULATORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K26957GCNA, ACRC; germ cell nuclear acidic protein-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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