Gene detail

Detailed information of evm.model.Chr01.499 in Hemicorallium imperiale

Genomic Location: Chr01:12982437...12998639
NR annotation: BAG55013.1, high mobility group 1 protein, partial [Saccostrea kegaki]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q42344	High mobility group B protein 4 OS=Arabidopsis thaliana OX=3702 GN=HMGB4 PE=1 SV=1
O49596	High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1
P33417	Intrastrand cross-link recognition protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IXR1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan
PF09011	HMG_box_2	HMG-box domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR031061	Family	High mobility group protein HMGB, plant	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46261	HIGH MOBILITY GROUP B PROTEIN 4-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25507	HMGBP; high mobility group B protein, plant	-	Chromosome and associated proteins	ko03036	deepkoala