Detailed information of evm.model.Chr01.516 in Hemicorallium imperiale

Genomic Location: Chr01:13363850...13378704
NR annotation: KFO80324.1, Transcription factor IIIA, partial [Cuculus canorus]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.516 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017457 (this species only) · gene tree & orthology
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR051061
all species →		FamilyZinc finger transcriptional regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46179
all species →		ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.516.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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