Detailed information of evm.model.Chr01.5265 in Hemicorallium imperiale

Genomic Location: Chr01:107085421...107090939
NR annotation: XP_028402693.1, transcription initiation factor TFIID subunit 9B-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5265 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VI33Transcription initiation factor TFIID subunit 9 OS=Mus musculus OX=10090 GN=Taf9 PE=1 SV=1
Q17QQ4Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE=2 SV=1
Q62880Transcription initiation factor TFIID subunit 9B OS=Rattus norvegicus OX=10116 GN=Taf9b PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007262 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02291
all species →		TFIID-31kDaTranscription initiation factor IID, 31kD subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003162
all species →		FamilyTranscription initiation factor TAFII31Interproscan
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR051431
all species →		FamilyTranscription initiation factor TFIID subunit 9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48068
all species →		TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006352
all species →		Biological ProcessDNA-templated transcription initiationInterproscan
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan
GO:0000124
all species →		Cellular ComponentSAGA complexInterproscan
GO:0003713
all species →		Molecular Functiontranscription coactivator activityInterproscan
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0043966
all species →		Biological Processobsolete histone H3 acetylationInterproscan
GO:0051123
all species →		Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5265.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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