Gene detail

Detailed information of evm.model.Chr01.5289 in Hemicorallium imperiale

Genomic Location: Chr01:107867310...107895817
NR annotation: XP_028405722.1, zinc metalloproteinase nas-15-like isoform X2 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q20191	Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
P55115	Zinc metalloproteinase nas-15 OS=Caenorhabditis elegans OX=6239 GN=nas-15 PE=2 SV=2
Q9N2V2	Zinc metalloproteinase nas-30 OS=Caenorhabditis elegans OX=6239 GN=nas-30 PE=3 SV=5

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF01549	ShK	ShK domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001506	Domain	Peptidase M12A	Interproscan
IPR003582	Domain	ShKT domain	Interproscan
IPR034035	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan