Detailed information of evm.model.Chr01.5371 in Hemicorallium imperiale

Genomic Location: Chr01:109708943...109817567
NR annotation: XP_028401303.1, rho guanine nucleotide exchange factor 12-like isoform X1 [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5371 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O15085Rho guanine nucleotide exchange factor 11 OS=Homo sapiens OX=9606 GN=ARHGEF11 PE=1 SV=1
Q9NZN5Rho guanine nucleotide exchange factor 12 OS=Homo sapiens OX=9606 GN=ARHGEF12 PE=1 SV=1
Q8R4H2Rho guanine nucleotide exchange factor 12 OS=Mus musculus OX=10090 GN=Arhgef12 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001658 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09128
all species →
RGS-likeRegulator of G protein signalling-like domainDomainInterproscan
PF00595
all species →
PDZPDZ domainDomainInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF00130
all species →
C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →
DomainPDZ domainInterproscan
IPR015212
all species →
DomainRegulator of G protein signalling-like domainInterproscan
IPR002219
all species →
DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036034
all species →
Homologous_superfamilyPDZ superfamilyInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR046349
all species →
Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR036305
all species →
Homologous_superfamilyRGS domain superfamilyInterproscan
IPR044926
all species →
Homologous_superfamilyRGS, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45872
all species →
RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM DInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0001664
all species →
Molecular FunctionG protein-coupled receptor bindingInterproscan
GO:0007186
all species →
Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5371.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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