Detailed information of evm.model.Chr01.541 in Hemicorallium imperiale

Genomic Location: Chr01:14121335...14126723
NR annotation: CAB4004169.1, Down syndrome critical region 3 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.541 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O35075Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1
O14972Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1
Q5RF33Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005414 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03643
all species →		Vps26Vacuolar protein sorting-associated protein 26 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014752
all species →		Homologous_superfamilyArrestin-like, C-terminalInterproscan
IPR028934
all species →		FamilyVacuolar protein sorting protein 26 relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12233
all species →		VACUOLAR PROTEIN SORTING 26 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.541.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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