Detailed information of evm.model.Chr01.5474 in Hemicorallium imperiale

Genomic Location: Chr01:113527605...113591393
NR annotation: CAB3982451.1, histone-lysine N-methyltransferase 2B isoform X2 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5474 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O08550Histone-lysine N-methyltransferase 2B OS=Mus musculus OX=10090 GN=Kmt2b PE=1 SV=3
Q9UMN6Histone-lysine N-methyltransferase 2B OS=Homo sapiens OX=9606 GN=KMT2B PE=1 SV=1
P55200Histone-lysine N-methyltransferase 2A OS=Mus musculus OX=10090 GN=Kmt2a PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004602 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05964
all species →
FYRNF/Y-rich N-terminusFamilyInterproscan
PF05965
all species →
FYRCF/Y rich C-terminusFamilyInterproscan
PF13771
all species →
zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan
PF02008
all species →
zf-CXXCCXXC zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036427
all species →
Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR003888
all species →
Conserved_siteFY-rich, N-terminalInterproscan
IPR046341
all species →
Homologous_superfamilySET domain superfamilyInterproscan
IPR003889
all species →
Conserved_siteFY-rich, C-terminalInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR002857
all species →
DomainZinc finger, CXXC-typeInterproscan
IPR034732
all species →
DomainExtended PHD (ePHD) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45838
all species →
HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0035097
all species →
Cellular Componenthistone methyltransferase complexInterproscan
GO:0042800
all species →
Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0045893
all species →
Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0051568
all species →
Biological Processobsolete histone H3-K4 methylationInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5474.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP