Detailed information of evm.model.Chr01.5563 in Hemicorallium imperiale

Genomic Location: Chr01:116512355...116583430
NR annotation: XP_048588705.1, ubiquitin carboxyl-terminal hydrolase 25 isoform X2 [Nematostella vectensis]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5563 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P57080Ubiquitin carboxyl-terminal hydrolase 25 OS=Mus musculus OX=10090 GN=Usp25 PE=1 SV=2
Q9UHP3Ubiquitin carboxyl-terminal hydrolase 25 OS=Homo sapiens OX=9606 GN=USP25 PE=1 SV=4
Q5I043Ubiquitin carboxyl-terminal hydrolase 28 OS=Mus musculus OX=10090 GN=Usp28 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008253 (this species only)
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443
all species →
UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02809
all species →
UIMUbiquitin interaction motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001394
all species →
DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR044635
all species →
FamilyUbiquitin carboxyl-terminal hydrolase 14-likeInterproscan
IPR003903
all species →
Conserved_siteUbiquitin interacting motifInterproscan
IPR028889
all species →
DomainUbiquitin specific protease domainInterproscan
IPR009060
all species →
Homologous_superfamilyUBA-like superfamilyInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR018200
all species →
Conserved_siteUbiquitin specific protease, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43982
all species →
UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →
Biological Processprotein deubiquitinationInterproscan
GO:0043161
all species →
Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061136
all species →
Biological Processregulation of proteasomal protein catabolic processInterproscan
GO:0070628
all species →
Molecular Functionproteasome bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5563.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP