Gene detail

Detailed information of evm.model.Chr01.557 in Hemicorallium imperiale

Genomic Location: Chr01:14591890...14619787
NR annotation: XP_028406685.1, LIM and calponin homology domains-containing protein 1-like isoform X1 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8WWI1	LIM domain only protein 7 OS=Homo sapiens OX=9606 GN=LMO7 PE=1 SV=3
Q3KQW7	LIM and calponin homology domains-containing protein 1 OS=Xenopus laevis OX=8355 GN=limch1 PE=2 SV=1
Q9UPQ0	LIM and calponin homology domains-containing protein 1 OS=Homo sapiens OX=9606 GN=LIMCH1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715	Domain	Calponin homology domain	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR029978	Family	LIM domain only protein 7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46767	LIM DOMAIN ONLY PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0023051	Biological Process	regulation of signaling	Interproscan
GO:0030155	Biological Process	regulation of cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06084	LMO7, FBXO20; F-box protein 20	-	Ubiquitin system	ko04121	deepkoala