Gene detail

Detailed information of evm.model.Chr01.5619 in Hemicorallium imperiale

Genomic Location: Chr01:117872483...117896749
NR annotation: CAB3994870.1, sel-1 homolog 3 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q68CR1	Protein sel-1 homolog 3 OS=Homo sapiens OX=9606 GN=SEL1L3 PE=1 SV=2
Q80TS8	Protein sel-1 homolog 3 OS=Mus musculus OX=10090 GN=Sel1l3 PE=2 SV=3
P61085	Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	E2\|UBC\|UBC
Ubiquitin Family	E2\|UEV\|UEV

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08238	Sel1	Sel1 repeat	Repeat	Interproscan
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan
PF00179	UQ_con	Ubiquitin-conjugating enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000608	Domain	Ubiquitin-conjugating enzyme E2	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR023313	Active_site	Ubiquitin-conjugating enzyme, active site	Interproscan
IPR042756	Family	Protein sel-1 homolog 3	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44444	PROTEIN SEL-1 HOMOLOG 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan