Detailed information of evm.model.Chr01.5866 in Hemicorallium imperiale

Genomic Location: Chr01:123916765...123918061
NR annotation: CAB3992034.1, E3 ubiquitin- ligase MSL2-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5866 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009933 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16685
all species →		zf-RING_10zinc RING finger of MSL2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR037922
all species →		FamilyE3 ubiquitin-protein ligase MSL2Interproscan
IPR032043
all species →		DomainE3 ubiquitin-protein ligase Msl2, zinc RING fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16048
all species →		MSL2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0043984
all species →		Biological Processobsolete histone H4-K16 acetylationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072487
all species →		Cellular ComponentMSL complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5866.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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