Gene detail

Detailed information of evm.model.Chr01.588 in Hemicorallium imperiale

Genomic Location: Chr01:15193898...15278826
NR annotation: XP_028404041.1, phosphoribosylformylglycinamidine synthase-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr01.588 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SUR0	Phosphoribosylformylglycinamidine synthase OS=Mus musculus OX=10090 GN=Pfas PE=1 SV=1
O15067	Phosphoribosylformylglycinamidine synthase OS=Homo sapiens OX=9606 GN=PFAS PE=1 SV=4
Q9M8D3	Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g74260 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004535 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan
PF18072 all species →	FGAR-AT_linker	Formylglycinamide ribonucleotide amidotransferase linker domain	Domain	Interproscan
PF18076 all species →	FGAR-AT_N	Formylglycinamide ribonucleotide amidotransferase N-terminal	Domain	Interproscan
PF00102 all species →	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF13507 all species →	GATase_5	CobB/CobQ-like glutamine amidotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR000242 all species →	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR010073 all species →	Family	Phosphoribosylformylglycinamidine synthase PurL	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036604 all species →	Homologous_superfamily	Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan
IPR041609 all species →	Domain	Phosphoribosylformylglycinamidine synthase, linker domain	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR040707 all species →	Domain	Phosphoribosylformylglycinamidine synthase, N-terminal	Interproscan
IPR003595 all species →	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10099 all species →	PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0004642 all species →	Molecular Function	phosphoribosylformylglycinamidine synthase activity	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Chr01.588.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.