Detailed information of evm.model.Chr01.5914 in Hemicorallium imperiale

Genomic Location: Chr01:124717093...124732373
NR annotation: CAB3979857.1, NAD(P) transhydrogenase, mitochondrial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5914 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q02962Paired box protein Pax-2 OS=Homo sapiens OX=9606 GN=PAX2 PE=1 SV=4
O57685Paired box protein Pax-2-A OS=Xenopus laevis OX=8355 GN=pax2-a PE=2 SV=2
Q02650Paired box protein Pax-5 OS=Mus musculus OX=10090 GN=Pax5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000410 (this species only)
Transcription factor familyHomeobox · all TF in this species
Transcription factor familyPAX · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292
all species →		PAX'Paired box' domainDomainInterproscan
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001523
all species →		DomainPaired domainInterproscan
IPR043565
all species →		FamilyPAX familyInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR043182
all species →		DomainPaired DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45636
all species →		PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15608PAX2; paired box protein 2-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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