Detailed information of evm.model.Chr01.5929 in Hemicorallium imperiale

Genomic Location: Chr01:125242373...125245053
NR annotation: CAB3992855.1, heparan-sulfate 6-O-sulfotransferase 2-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5929 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0MGZ5Heparan-sulfate 6-O-sulfotransferase 1-B OS=Danio rerio OX=7955 GN=hs6st1b PE=2 SV=3
A0MGZ7Heparan-sulfate 6-O-sulfotransferase 3-B OS=Danio rerio OX=7955 GN=hs6st3b PE=1 SV=1
Q91ZB4Heparan-sulfate 6-O-sulfotransferase 1 OS=Cricetulus griseus OX=10029 GN=HS6ST1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004958 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03567
all species →
Sulfotransfer_2Sulfotransferase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005331
all species →
FamilySulfotransferaseInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010635
all species →
FamilyHeparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12812
all species →
HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008146
all species →
Molecular Functionsulfotransferase activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0015015
all species →
Biological Processheparan sulfate proteoglycan biosynthetic process, enzymatic modificationInterproscan
GO:0017095
all species →
Molecular Functionheparan sulfate 6-O-sulfotransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5929.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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