Detailed information of evm.model.Chr01.5945 in Hemicorallium imperiale

Genomic Location: Chr01:125549225...125557316
NR annotation: CAB3994397.1, Trafficking particle complex subunit 1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.5945 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5NCF2Trafficking protein particle complex subunit 1 OS=Mus musculus OX=10090 GN=Trappc1 PE=1 SV=1
Q2KMM2Trafficking protein particle complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Trappc1 PE=2 SV=1
Q17QI1Trafficking protein particle complex subunit 1 OS=Bos taurus OX=9913 GN=TRAPPC1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009508 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04099
all species →
SybindinSybindin-like family FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007233
all species →
FamilyTrafficking protein particle complex subunitInterproscan
IPR011012
all species →
Homologous_superfamilyLongin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23249
all species →
TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan
GO:0030008
all species →
Cellular ComponentTRAPP complexInterproscan
GO:0006888
all species →
Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.5945.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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