Detailed information of evm.model.Chr01.6008 in Hemicorallium imperiale

Genomic Location: Chr01:127082194...127133288
NR annotation: XP_028401377.1, 26S proteasome non-ATPase regulatory subunit 1-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6008 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9946026S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens OX=9606 GN=PSMD1 PE=1 SV=2
Q5R5S426S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii OX=9601 GN=PSMD1 PE=2 SV=1
Q3TXS726S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004541 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01851
all species →		PC_repProteasome/cyclosome repeatRepeatInterproscan
PF18004
all species →		RPN2_C26S proteasome regulatory subunit RPN2 C-terminal domainDomainInterproscan
PF13646
all species →		HEAT_2HEAT repeatsRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002015
all species →		RepeatProteasome/cyclosome repeatInterproscan
IPR040623
all species →		Domain26S proteasome regulatory subunit RPN2, C-terminalInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10943
all species →		26S PROTEASOME NON-ATPASE REGULATORY SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0008540
all species →		Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0034515
all species →		Cellular Componentproteasome storage granuleInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03032PSMD1, RPN2; 26S proteasome regulatory subunit N2-Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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