Detailed information of evm.model.Chr01.6018 in Hemicorallium imperiale

Genomic Location: Chr01:127335225...127338109
NR annotation: CAB4033214.1, C-ets-1 isoform X2 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6018 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P15036Protein C-ets-2 OS=Homo sapiens OX=9606 GN=ETS2 PE=1 SV=1
P19102Protein c-ets-2-A OS=Xenopus laevis OX=8355 GN=ets2-a PE=2 SV=2
Q91712Protein c-ets-2-B OS=Xenopus laevis OX=8355 GN=ets2-b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000175 (this species only) · gene tree & orthology
Transcription factor familyETS · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02198
all species →
SAM_PNTSterile alpha motif (SAM)/Pointed domainDomainInterproscan
PF00178
all species →
EtsEts-domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000418
all species →
DomainEts domainInterproscan
IPR003118
all species →
DomainPointed domainInterproscan
IPR013761
all species →
Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR046328
all species →
FamilyETS familyInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001660
all species →
DomainSterile alpha motif domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11849
all species →
ETSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →
Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154
all species →
Biological Processcell differentiationInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.6018.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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