Detailed information of evm.model.Chr01.6093 in Hemicorallium imperiale

Genomic Location: Chr01:129797821...129899360
NR annotation: CAB3977639.1, lipopolysaccharide-responsive and beige-like anchor, partial [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6093 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50851Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens OX=9606 GN=LRBA PE=1 SV=4
Q9EPN1Neurobeachin OS=Mus musculus OX=10090 GN=Nbea PE=1 SV=1
Q8NFP9Neurobeachin OS=Homo sapiens OX=9606 GN=NBEA PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002584 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15787
all species →
DUF4704Neurobeachin/BDCP, DUF4704 alpha solenoid regionRepeatInterproscan
PF20266
all species →
Mab-21_CMab-21 protein HhH/H2TH-like domainDomainInterproscan
PF20426
all species →
NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan
PF06469
all species →
DUF1088Neurobeachin-like, DUF1088DomainInterproscan
PF02138
all species →
BeachBeige/BEACH domainFamilyInterproscan
PF14844
all species →
PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031570
all species →
DomainNeurobeachin/BDCP, DUF4704Interproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036372
all species →
Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR000409
all species →
DomainBEACH domainInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR050865
all species →
FamilyBEACH Domain-ContainingInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR046906
all species →
DomainMab-21-like, HhH/H2TH-like domainInterproscan
IPR046851
all species →
DomainNeurobeachin, beta-propeller domainInterproscan
IPR010508
all species →
DomainNeurobeachin-like, DUF1088Interproscan
IPR023362
all species →
DomainPH-BEACH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743
all species →
BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0008104
all species →
Biological Processprotein localizationInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0019901
all species →
Molecular Functionprotein kinase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.6093.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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