Gene detail

Detailed information of evm.model.Chr01.6203 in Hemicorallium imperiale

Genomic Location: Chr01:132326905...132369355
NR annotation: XP_028401443.1, LOW QUALITY PROTEIN: protein Jade-1-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6IE82	Protein Jade-3 OS=Mus musculus OX=10090 GN=Jade3 PE=1 SV=1
Q0P4S5	Protein Jade-3 OS=Xenopus tropicalis OX=8364 GN=jade3 PE=2 SV=1
Q92613	Protein Jade-3 OS=Homo sapiens OX=9606 GN=JADE3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13831	PHD_2	PHD-finger	Family	Interproscan
PF13832	zf-HC5HC2H_2	PHD-zinc-finger like domain	Domain	Interproscan
PF10513	EPL1	Enhancer of polycomb-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050701	Family	Histone Modification Regulator	Interproscan
IPR034732	Domain	Extended PHD (ePHD) domain	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR019786	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR019542	Domain	Enhancer of polycomb-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13793	PHD FINGER PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22156	JADE3; protein Jade-3	-	Chromosome and associated proteins	ko03036	deepkoala