Detailed information of evm.model.Chr01.6240 in Hemicorallium imperiale

Genomic Location: Chr01:133392946...133399353
NR annotation: XP_028412715.1, E3 SUMO-protein ligase RanBP2-like isoform X3 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6240 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6NKT7RanBP2-like and GRIP domain-containing protein 3 OS=Homo sapiens OX=9606 GN=RGPD3 PE=1 SV=2
P0DJD0RANBP2-like and GRIP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RGPD1 PE=2 SV=1
O14715RANBP2-like and GRIP domain-containing protein 8 OS=Homo sapiens OX=9606 GN=RGPD8 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003339 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00641
all species →
zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF00638
all species →
Ran_BP1RanBP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045255
all species →
FamilyRan binding protein RanBP1-likeInterproscan
IPR000156
all species →
DomainRan binding domainInterproscan
IPR001876
all species →
DomainZinc finger, RanBP2-typeInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23138
all species →
RAN BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005096
all species →
Molecular FunctionGTPase activator activityInterproscan
GO:0005643
all species →
Cellular Componentnuclear poreInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0046907
all species →
Biological Processintracellular transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.6240.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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