Gene detail

Detailed information of evm.model.Chr01.6267 in Hemicorallium imperiale

Genomic Location: Chr01:133997855...134001747
NR annotation: XP_046852914.1, non-histone chromosomal protein 6-like [Xenia sp. Carnegie-2017]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O15347	High mobility group protein B3 OS=Homo sapiens OX=9606 GN=HMGB3 PE=1 SV=4
O54879	High mobility group protein B3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=3
Q32L31	High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan
PF09011	HMG_box_2	HMG-box domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR051965	Family	Chromatin Regulation and Neuronal Gene Expression	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46040	HIGH MOBILITY GROUP PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10802	HMGB1; high mobility group protein B1	-	Exosome	ko04147	deepkoala