Detailed information of evm.model.Chr01.6275 in Hemicorallium imperiale

Genomic Location: Chr01:134158255...134232334
NR annotation: CAB3985094.1, SID1 transmembrane family member 1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6275 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NXL6SID1 transmembrane family member 1 OS=Homo sapiens OX=9606 GN=SIDT1 PE=1 SV=2
Q6AXF6SID1 transmembrane family member 1 OS=Mus musculus OX=10090 GN=Sidt1 PE=1 SV=1
Q8NBJ9SID1 transmembrane family member 2 OS=Homo sapiens OX=9606 GN=SIDT2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003895 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13965
all species →		SID-1_RNA_chandsRNA-gated channel SID-1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025958
all species →		FamilySID1 transmembrane familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12185
all species →		SID1 TRANSMEMBRANE FAMILY MEMEBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005764
all species →		Cellular ComponentlysosomeInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0050658
all species →		Biological ProcessRNA transportInterproscan
GO:0051033
all species →		Molecular FunctionRNA transmembrane transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K26111SIDT1; SID1 transmembrane family member 1-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP