Detailed information of evm.model.Chr01.630 in Hemicorallium imperiale

Genomic Location: Chr01:16239371...16262488
NR annotation: XP_028405015.1, PAN2-PAN3 deadenylation complex subunit pan3-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.630 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q640Q5PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus OX=10090 GN=Pan3 PE=1 SV=4
Q58A45PAN2-PAN3 deadenylation complex subunit PAN3 OS=Homo sapiens OX=9606 GN=PAN3 PE=1 SV=3
A1L1C7PAN2-PAN3 deadenylation complex subunit pan3 OS=Xenopus tropicalis OX=8364 GN=pan3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005429 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642
all species →		zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030844
all species →		FamilyPAN2-PAN3 deadenylation complex subunit PAN3Interproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR000719
all species →		DomainProtein kinase domainInterproscan
IPR011009
all species →		Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12272
all species →		DEADENYLATION COMPLEX SUBUNIT PAN3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000289
all species →		Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006397
all species →		Biological ProcessmRNA processingInterproscan
GO:0008143
all species →		Molecular Functionpoly(A) bindingInterproscan
GO:0031251
all species →		Cellular ComponentPAN complexInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0004672
all species →		Molecular Functionprotein kinase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006468
all species →		Biological Processprotein phosphorylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.630.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP