Detailed information of evm.model.Chr01.6338 in Hemicorallium imperiale

Genomic Location: Chr01:135816499...135850548
NR annotation: CAB3991721.1, Transcription factor Dp-1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6338 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q17QZ4Transcription factor Dp-1 OS=Bos taurus OX=9913 GN=TFDP1 PE=2 SV=1
Q14186Transcription factor Dp-1 OS=Homo sapiens OX=9606 GN=TFDP1 PE=1 SV=1
Q08639Transcription factor Dp-1 OS=Mus musculus OX=10090 GN=Tfdp1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004604 (this species only)
Transcription factor familyE2F · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02319
all species →		E2F_TDPE2F/DP family winged-helix DNA-binding domainDomainInterproscan
PF08781
all species →		DPTranscription factor DPDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR015648
all species →		FamilyTranscription factor DPInterproscan
IPR014889
all species →		DomainTranscription factor DP, C-terminalInterproscan
IPR003316
all species →		DomainE2F/DP family, winged-helix DNA-binding domainInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR037241
all species →		Homologous_superfamilyE2F-DP heterodimerization regionInterproscan
IPR038168
all species →		Homologous_superfamilyTranscription factor DP, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12548
all species →		TRANSCRIPTION FACTOR DPInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005667
all species →		Cellular Componenttranscription regulator complexInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0051726
all species →		Biological Processregulation of cell cycleInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.6338.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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