Detailed information of evm.model.Chr01.6354 in Hemicorallium imperiale

Genomic Location: Chr01:136531030...136587701
NR annotation: XP_028405675.1, glycine receptor subunit alpha-2-like [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6354 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75311Glycine receptor subunit alpha-3 OS=Homo sapiens OX=9606 GN=GLRA3 PE=1 SV=2
Q91XP5Glycine receptor subunit alpha-3 OS=Mus musculus OX=10090 GN=Glra3 PE=1 SV=2
P24524Glycine receptor subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Glra3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017394 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18758
all species →
KDZKyakuja-Dileera-Zisupton transposaseFamilyInterproscan
PF02931
all species →
Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932
all species →
Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF18802
all species →
CxC1CxC1 like cysteine cluster associated with KDZ transposasesDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038050
all species →
Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR006201
all species →
FamilyNeurotransmitter-gated ion-channelInterproscan
IPR040521
all species →
FamilyKyakuja-Dileera-Zisupton transposaseInterproscan
IPR006202
all species →
DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036719
all species →
Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006029
all species →
DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR041320
all species →
DomainCxC1-like cysteine cluster associated with KDZ transposasesInterproscan
IPR018000
all species →
Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR036734
all species →
Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006028
all species →
FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18945
all species →
NEUROTRANSMITTER GATED ION CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004888
all species →
Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216
all species →
Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0007268
all species →
Biological Processchemical synaptic transmissionInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0030594
all species →
Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220
all species →
Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391
all species →
Biological Processregulation of membrane potentialInterproscan
GO:0043005
all species →
Cellular Componentneuron projectionInterproscan
GO:0045202
all species →
Cellular ComponentsynapseInterproscan
GO:0050877
all species →
Biological Processnervous system processInterproscan
GO:0005230
all species →
Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811
all species →
Biological Processmonoatomic ion transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.6354.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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