Detailed information of evm.model.Chr01.6389 in Hemicorallium imperiale

Genomic Location: Chr01:137630965...137719078
NR annotation: XP_028401891.1, fibronectin type-III domain-containing protein 3A-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6389 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZJP5Fibronectin type-III domain-containing protein 3a OS=Gallus gallus OX=9031 GN=FNDC3A PE=2 SV=2
Q53EP0Fibronectin type III domain-containing protein 3B OS=Homo sapiens OX=9606 GN=FNDC3B PE=1 SV=2
Q6NWW9Fibronectin type III domain-containing protein 3B OS=Mus musculus OX=10090 GN=Fndc3b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004514 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050617
all species →		FamilyE3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteinsInterproscan
IPR003529
all species →		Conserved_siteLong hematopoietin receptor, Gp130 family 2, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24099
all species →		E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004896
all species →		Molecular Functioncytokine receptor activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24485FNDC3; fibronectin type III domain-containing protein 3-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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