Detailed information of evm.model.Chr01.6562 in Hemicorallium imperiale

Genomic Location: Chr01:141626556...141640667
NR annotation: XP_020630443.1, F-box/LRR-repeat protein 18-like [Orbicella faveolata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6562 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003924 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19729
all species →		FBXL18_LRRF-box/LRR-repeat protein 18, LRRRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045627
all species →		DomainF-box/LRR-repeat protein 18, LRR domainInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16134
all species →		F-BOX/TPR REPEAT PROTEIN POF3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019005
all species →		Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146
all species →		Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10284FBXL18; F-box and leucine-rich repeat protein 18-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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