Detailed information of evm.model.Chr01.6647 in Hemicorallium imperiale

Genomic Location: Chr01:144370709...144381077
NR annotation: CAB3998467.1, RING finger 219 [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6647 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K2Y0ORC ubiquitin ligase 1 OS=Mus musculus OX=10090 GN=Obi1 PE=1 SV=2
Q5W0B1ORC ubiquitin ligase 1 OS=Homo sapiens OX=9606 GN=OBI1 PE=1 SV=1
Q5RD97ORC ubiquitin ligase 1 OS=Pongo abelii OX=9601 GN=OBI1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005568 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR039209
all species →		FamilyORC ubiquitin ligase 1Interproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR035691
all species →		DomainORC ubiquitin ligase 1, RING fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14609
all species →		RING FINGER PROTEIN 219Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006275
all species →		Biological Processregulation of DNA replicationInterproscan
GO:0006513
all species →		Biological Processprotein monoubiquitinationInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24091OBI1; ORC ubiquitin ligase 1EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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