Detailed information of evm.model.Chr01.6668 in Hemicorallium imperiale

Genomic Location: Chr01:145023493...145051590
NR annotation: XP_028405583.1, ubiquitin carboxyl-terminal hydrolase isozyme L3-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.6668 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P15374Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL3 PE=1 SV=1
Q2TBG8Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 PE=2 SV=1
Q06AB3Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa OX=9823 GN=UCHL3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004124 (this species only)
Ubiquitin familyDUB|UCH|UCH · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01088
all species →		Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001578
all species →		DomainPeptidase C12, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR036959
all species →		Homologous_superfamilyPeptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10589
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.6668.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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