Detailed information of evm.model.Chr01.675 in Hemicorallium imperiale

Genomic Location: Chr01:17376345...17390574
NR annotation: XP_028403999.1, trafficking protein particle complex subunit 2-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.675 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28IG8Trafficking protein particle complex subunit 2 OS=Xenopus tropicalis OX=8364 GN=trappc2 PE=2 SV=1
Q3T0F2Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 PE=2 SV=1
Q08CN0Trafficking protein particle complex subunit 2 OS=Danio rerio OX=7955 GN=trappc2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009268 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04628
all species →
Sedlin_NSedlin, N-terminal conserved regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006722
all species →
FamilyTrafficking protein particle complex subunit 2Interproscan
IPR011012
all species →
Homologous_superfamilyLongin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12403
all species →
TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006888
all species →
Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030008
all species →
Cellular ComponentTRAPP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr01.675.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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