Gene detail

Detailed information of evm.model.Chr01.6768 in Hemicorallium imperiale

Genomic Location: Chr01:148575457...148613142
NR annotation: XP_028405618.1, leucine-rich repeat and calponin homology domain-containing protein 3-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5VUJ6	Leucine-rich repeat and calponin homology domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LRCH2 PE=1 SV=2
Q3UMG5	Leucine-rich repeat and calponin homology domain-containing protein 2 OS=Mus musculus OX=10090 GN=Lrch2 PE=2 SV=2
Q96II8	DISP complex protein LRCH3 OS=Homo sapiens OX=9606 GN=LRCH3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00560	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715	Domain	Calponin homology domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR050216	Family	Leucine-rich repeat domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48051	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17493	CAMSAP; calmodulin-regulated spectrin-associated protein	-	Cytoskeleton proteins	ko04812	deepkoala