Detailed information of evm.model.Chr01.71 in Hemicorallium imperiale

Genomic Location: Chr01:1202572...1258335
NR annotation: CAB3986722.1, inturned isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr01.71 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2I0E5Protein inturned OS=Xenopus laevis OX=8355 GN=intu PE=2 SV=1
E7FCN8Protein inturned OS=Danio rerio OX=7955 GN=intu PE=3 SV=1
F1MDL2Protein inturned OS=Bos taurus OX=9913 GN=INTU PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002100 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19031
all species →		Intu_longin_1First Longin domain of INTU, CCZ1 and HPS4DomainInterproscan
PF19033
all species →		Intu_longin_3Intu longin-like domain 3DomainInterproscan
PF19032
all species →		Intu_longin_2Intu longin-like domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR039151
all species →		FamilyProtein inturnedInterproscan
IPR001478
all species →		DomainPDZ domainInterproscan
IPR043987
all species →		DomainCCZ1/INTU/HSP4, first Longin domainInterproscan
IPR043989
all species →		DomainCCZ1/INTU/HPS4, third Longin domainInterproscan
IPR043988
all species →		DomainCCZ1/INTU, second Longin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21082
all species →		PROTEIN INTURNEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0001736
all species →		Biological Processestablishment of planar polarityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005929
all species →		Cellular ComponentciliumInterproscan
GO:0007399
all species →		Biological Processnervous system developmentInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22862INTU, CPLANE4, PDZD6; protein inturned-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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