Gene detail

Detailed information of evm.model.Chr01.806 in Hemicorallium imperiale

Genomic Location: Chr01:20889708...20903135
NR annotation: CAB3989762.1, Vacuolar ATPase assembly integral membrane vma21 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr01.806 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8JLV7	Vacuolar ATPase assembly integral membrane protein vma21 OS=Danio rerio OX=7955 GN=vma21 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010671 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09446 all species →	VMA21	VMA21-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019013 all species →	Family	Vacuolar ATPase assembly integral membrane protein Vma21	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31792 all species →	VACUOLAR ATPASE ASSEMBLY INTEGRAL MEMBRANE PROTEIN VMA21	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070072 all species →	Biological Process	vacuolar proton-transporting V-type ATPase complex assembly	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23952	VMA21; vacuolar ATPase assembly integral membrane protein VMA21	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.