Detailed information of evm.model.Chr01.9 in Hemicorallium imperiale

Genomic Location: Chr01:122170...125010
NR annotation: CAA0123634.1, Glycine dehydrogenase (decarboxylating) [BD1-7 clade bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q21HU3Glycine dehydrogenase (decarboxylating) OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=gcvP PE=3 SV=1
Q6LHN5Glycine dehydrogenase (decarboxylating) OS=Photobacterium profundum (strain SS9) OX=298386 GN=gcvP PE=3 SV=1
Q47XG2Glycine dehydrogenase (decarboxylating) 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) OX=167879 GN=gcvP2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR003437FamilyGlycine dehydrogenase (decarboxylating)Interproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0006544Biological Processglycine metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00281GLDC, gcvP; glycine cleavage system P protein (glycine dehydrogenase)EC:1.4.4.2
Lipoic acid metabolismko00785deepkoala

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