Detailed information of evm.model.Chr02.1006 in Hemicorallium imperiale

Genomic Location: Chr02:26727942...26794099
NR annotation: CAB4000924.1, dystrophin-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1006 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7YU29Dystrophin, isoform E OS=Drosophila melanogaster OX=7227 GN=Dys PE=1 SV=1
P11533Dystrophin OS=Gallus gallus OX=9031 GN=DMD PE=2 SV=1
Q9VDW3Dystrophin, isoform B OS=Drosophila melanogaster OX=7227 GN=Dys PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003291 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00397
all species →		WWWW domainDomainInterproscan
PF09069
all species →		EF-hand_3EF-handDomainInterproscan
PF00569
all species →		ZZZinc finger, ZZ typeDomainInterproscan
PF09068
all species →		EF-hand_2EF handDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000433
all species →		DomainZinc finger, ZZ-typeInterproscan
IPR001202
all species →		DomainWW domainInterproscan
IPR043145
all species →		Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR015154
all species →		DomainEF-hand domain, type 2Interproscan
IPR015153
all species →		DomainEF-hand domain, type 1Interproscan
IPR050774
all species →		FamilyKCMF1 and DystrophinInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR036020
all species →		Homologous_superfamilyWW domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12268
all species →		E3 UBIQUITIN-PROTEIN LIGASE KCMF1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0099536
all species →		Biological Processsynaptic signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.1006.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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