Detailed information of evm.model.Chr02.104 in Hemicorallium imperiale

Genomic Location: Chr02:2507308...2516155
NR annotation: XP_028404443.1, HMG box-containing protein 4-like isoform X1 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.104 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UGU5HMG domain-containing protein 4 OS=Homo sapiens OX=9606 GN=HMGXB4 PE=1 SV=2
Q5BL56HMG box-containing protein 4 OS=Xenopus tropicalis OX=8364 GN=hmgxb4 PE=2 SV=1
Q6WKW9HMG box-containing protein 4 OS=Xenopus laevis OX=8355 GN=hmgxb4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008464 (this species only) · gene tree & orthology
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042477
all species →
FamilyHMG domain-containing protein 4Interproscan
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46584
all species →
HMG DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
No Gene Ontology signature was recorded for evm.model.Chr02.104 in Hemicorallium imperiale.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11298HMGXB4, HMG2L1; HMG domain-containing protein 4-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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