Detailed information of evm.model.Chr02.1211 in Hemicorallium imperiale

Genomic Location: Chr02:32271591...32287894
NR annotation: XP_028404432.1, THUMP domain-containing protein 1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1211 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99J36THUMP domain-containing protein 1 OS=Mus musculus OX=10090 GN=Thumpd1 PE=1 SV=1
Q9NXG2THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=THUMPD1 PE=1 SV=2
Q24K03THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=THUMPD1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007628 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02926
all species →		THUMPTHUMP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040183
all species →		FamilyTHUMP domain-containing protein 1-likeInterproscan
IPR004114
all species →		DomainTHUMP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13452
all species →		THUMP DOMAIN CONTAINING PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06963TAN1, THUMPD1; tRNA acetyltransferase TAN1-Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP