Gene detail

Detailed information of evm.model.Chr02.130 in Hemicorallium imperiale

Genomic Location: Chr02:3074913...3078183
NR annotation: XP_028403748.1, thioredoxin-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr02.130 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O96952	Thioredoxin OS=Geodia cydonium OX=6047 GN=THIO PE=3 SV=1
Q9DGI3	Thioredoxin OS=Ictalurus punctatus OX=7998 GN=txn PE=3 SV=1
Q98TX1	Thioredoxin OS=Ophiophagus hannah OX=8665 GN=TXN PE=3 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000679 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085 all species →	Thioredoxin	Thioredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR017937 all species →	Conserved_site	Thioredoxin, conserved site	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46115 all species →	THIOREDOXIN-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0015035 all species →	Molecular Function	protein-disulfide reductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03671	TXN, trxA; thioredoxin	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.