Detailed information of evm.model.Chr02.1432 in Hemicorallium imperiale

Genomic Location: Chr02:37811639...37844644
NR annotation: CAB3982190.1, acid-sensing ion channel 2-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1432 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q16515Acid-sensing ion channel 2 OS=Homo sapiens OX=9606 GN=ASIC2 PE=1 SV=1
Q925H0Acid-sensing ion channel 2 OS=Mus musculus OX=10090 GN=Asic2 PE=1 SV=1
Q62962Acid-sensing ion channel 2 OS=Rattus norvegicus OX=10116 GN=Asic2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000230 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09793
all species →		ADAnticodon-binding domainDomainInterproscan
PF00858
all species →		ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF21166
all species →		LSM12_LSMLSM12, LSM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019181
all species →		DomainLSM12, anticodon-binding domainInterproscan
IPR020903
all species →		Conserved_siteEpithelial sodium channel, conserved siteInterproscan
IPR047574
all species →		DomainAD domainInterproscan
IPR001873
all species →		FamilyEpithelial sodium channelInterproscan
IPR048478
all species →		DomainLSM12, LSM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11690
all species →		AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005272
all species →		Molecular Functionsodium channel activityInterproscan
GO:0006814
all species →		Biological Processsodium ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0015280
all species →		Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725
all species →		Biological Processsodium ion transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr02.1432.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP