Detailed information of evm.model.Chr02.145 in Hemicorallium imperiale

Genomic Location: Chr02:3527826...3530101
NR annotation: CAB3985159.1, cell division cycle 16 homolog [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.145 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13042Cell division cycle protein 16 homolog OS=Homo sapiens OX=9606 GN=CDC16 PE=1 SV=2
Q8R349Cell division cycle protein 16 homolog OS=Mus musculus OX=10090 GN=Cdc16 PE=1 SV=1
B3DNN5Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=APC6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008834 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07719
all species →		TPR_2Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF12895
all species →		ANAPC3Anaphase-promoting complex, cyclosome, subunit 3RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR013105
all species →		RepeatTetratricopeptide repeat 2Interproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12558
all species →		CELL DIVISION CYCLE 16,23,27Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005680
all species →		Cellular Componentanaphase-promoting complexInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0031145
all species →		Biological Processanaphase-promoting complex-dependent catabolic processInterproscan
GO:0045842
all species →		Biological Processpositive regulation of mitotic metaphase/anaphase transitionInterproscan
GO:0051301
all species →		Biological Processcell divisionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03353APC6, CDC16; anaphase-promoting complex subunit 6-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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