Detailed information of evm.model.Chr02.1473 in Hemicorallium imperiale

Genomic Location: Chr02:39260667...39277200
NR annotation: XP_028413032.1, tRNA (guanine-N(7)-)-methyltransferase-like isoform X2 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr02.1473 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A9UMM1tRNA (guanine-N(7)-)-methyltransferase B OS=Xenopus tropicalis OX=8364 GN=mettl1-B PE=2 SV=1
Q5XJ57tRNA (guanine-N(7)-)-methyltransferase OS=Danio rerio OX=7955 GN=mettl1 PE=2 SV=2
Q9Z120tRNA (guanine-N(7)-)-methyltransferase OS=Mus musculus OX=10090 GN=Mettl1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005226 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02390
all species →		Methyltransf_4Putative methyltransferase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003358
all species →		FamilytRNA (guanine-N-7) methyltransferase, Trmb typeInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23417
all species →		3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0008176
all species →		Molecular FunctiontRNA (guanine(46)-N7)-methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0036265
all species →		Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527
all species →		Cellular ComponenttRNA methyltransferase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00564rsmC; 16S rRNA (guanine1207-N2)-methyltransferaseEC:2.1.1.172
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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